Research
Determining the role of OMV-associated bacterial sphingolipids in modulating murine norovirus infection in macrophages
Department: Microbiology and Cell Science, UF College of Agricultural and Life Sciences
Mentors: Dr. Jones and PhD Candidate Joe Sullivan
Time Affiliated: September 2023-Present
Background
Human norovirus (HuNoV) is the primary cause of acute gastroenteritis globally and the leading cause of foodborne illness in the United States [1,3]. Despite the ubiquity of HuNoV, preventative therapeutics have not yet been developed against it.
Noroviruses infect the intestinal tract, where commensal gut bacteria reside. Previous research has shown that both human and murine noroviruses (MNV) directly engage with these commensal bacteria, leading to changes in bacterial gene expression [2]. A study by the Jones Laboratory has indicated that an increased production of small bacterial outer membrane vesicles (OMVs) was observed as a result of the alterations in gene expression in two Gram-negative bacterial species—Enterobacter cloacae and Bacteroides thetaiotaomicron—that commonly populate the human gut [2]. Previous studies have also shown that OMVs produced by E. cloacae and B. thetaiotaomicron can prompt an anti-viral immune response in murine-derived macrophages [1]. The specific component within the OMVs that contributes to the immune response is unknown, however.
My Project
My research project involves investigating sphingolipids—a class of lipid compounds found within the OMVs that has displayed immune signaling capabilities—as the potential component responsible for stimulating the antiviral response in murine macrophages [1]. I hypothesize that macrophages exposed to sphingolipid-deletion mutant OMVs will not suppress viral replication to the same extent as wild-type OMVs. I use OMVs from wild-type B. thetaiotaomicron and a sphingolipid-deletion mutant of B. thetaiotaomicron and measure MNV replication and host immune responses in the presence and absence of these vesicles. I then compare the levels of MNV replication from each condition at different time points. I will also analyze the expression of genes associated with suppression of norovirus replication following treatment with vesicles. The goal of this project is to determine the ability of the OMV-associated bacterial sphingolipids to suppress MNV replication in murine macrophages.
Skills I've Learned
During my time in the Jones Lab, I have learned how to perform biological and molecular techniques, including microBCA protein assays, exosome depletion, cell culture, RNA extraction, RNA purification, and RT-qPCR. I have acquired data analysis skills as well. I’ve also learned more about how to maintain an aseptic environment, such as working in a biosafety cabinet or next to a Bunsen burner, to prevent contamination of samples. I've learned how to make media to grow bacteria, perform routine lab maintenance, and analyze cells under a microscope.
My research experience has provided me with the skills I need to succeed in the future as I work towards receiving a PhD. I am very thankful for my mentors that have guided me through this experience and taught me all the techniques I’ve learned!
References
1. Bhar, S., Zhao, G., Bartel, J. D., Sterchele, H., Del Mazo, A., Emerson, L. E., Edelmann, M. J., & Jones, M. K. (2022). Bacterial extracellular vesicles control murine norovirus infection through modulation of antiviral immune responses. Frontiers in Immunology, 13, 909949. https://doi.org/10.3389/fimmu.2022.909949
2. Mosby, C. A., Bhar, S., Phillips, M. B., Edelmann, M. J., & Jones, M. K. (2022). Interaction with mammalian enteric viruses alters outer membrane vesicle production and content by commensal bacteria. Journal of Extracellular Vesicles, 11(1), e12172. https://doi.org/10.1002/jev2.12172
3. National Center for Immunization and Respiratory Diseases, Division of Viral Diseases. (2023, May 10). About norovirus. Centers for Disease Control and Prevention. https://www.cdc.gov/norovirus/about/index.html